Prof. Bo Sun has received an NSF CAREER award for his biophysics research. Please look at the longer IMPACT article for details. (And he’s also the 2019 Richard T. Jones New Investigator Award for the Medical Research Foundation of Oregon, more details on that after the ceremony in Portland later this term.)

Jake Jacobs (far right) and his family.

Robert  “Jake” Jacobs has been awarded a NASA Future Investigators in NASA Earth and Space Science and Technology (FINESST) award for 2019 in the competitive Earth Science Division. With this award, he is developing a method to analyze latitudinal circulation utilizing satellite measurements of ocean surface vector winds measured by the QuickSCAT and ASCAT scatterometers. Our objectives are to improve understanding of climatological atmospheric circulation patterns and how surface winds in the tropical Pacific influence El Niño-Southern Oscillation (ENSO) events. Latitudinal circulation plays an important role in weather and climate variability as it shapes where precipitation falls and how heat moves from the equator to polar regions. Improved accuracy of the boundaries between large-scale atmospheric cells can advance our understanding of climate and weather models.

Robert “Jake” Jacobs has been awarded a NASA Future Investigators in NASA Earth and Space Science and Technology (FINESST) award for 2019 in the competitive Earth Science Division.  With this award, he is developing a method to analyze latitudinal circulation utilizing satellite measurements of ocean surface vector winds measured by the QuickSCAT and ASCAT scatterometers.  Our objectives are to improve understanding of climatological atmospheric circulation patterns and how surface winds in the tropical Pacific influence El Niño-Southern Oscillation (ENSO) events.  Latitudinal circulation plays an important role in weather and climate variability as it shapes where precipitation falls and how heat moves from the equator to polar regions.  Improved accuracy of the boundaries between large-scale atmospheric cells can advance our understanding of climate and weather models.

This type of work while exciting is not new, as astronautical projects have been a driving force in Jake’s life. His passion for space has taken him from an undergraduate degree in Aerospace Engineering, from Purdue University, to satellite remote sensing at Oregon State University (OSU) where he is completing a PhD in Physics. Before arriving at OSU, Jake obtained a master’s degree in physics from Eastern Michigan University (EMU). While there, he worked with funds from the NASA Space Grant to develop an ion source that would be used in sputtering experiments to model the solar wind.

Connecting with his advisor, Dr. Larry O’Neill at OSU, has created an excellent partnership, as they bring different strengths to the table.  Dr. O’Neill’s wealth of experience has helped Jake to greatly advance his knowledge of atmospheric and oceanic sciences.  While Jake’s physics and math background have assisted with advancing spatial derivative analysis techniques.  This newest project has combined Jake’s passion for physics and math with a novel astronautical venture. He greatly looks forward to continuing this project with the support of the FINESST Fellowship.

In his limited free time, Jake enjoys reading, hiking, swimming and playing disc golf with his two small children, wife and two dogs.  An extra joy in his life is watching his children grow to love the universe and all its boundless opportunities.  The family also enjoys star gazing, which can be difficult in Oregon, so they use a home star theater system to learn about space, stars and the world above.

Tyler Parsotan
Tyler Parsotan

Tyler Parsotan has been awarded a NASA Future Investigators in NASA Earth and Space Science and Technology (FINESST) award for 2019 in the extremely competitive Astrophysics category. His proposal, titled “Demystifying the Interplay between Explosion Dynamics and Electromagnetic Radiation in Gamma Ray Bursts”, was one of the 11% of selected proposals in this category.

Originally from NY, Tyler is a first generation student. His family is from the Caribbean island nation of Trinidad and Tobago. He acquired a BS in Space Physics from Embry-Riddle Aeronautical University and is now working on a PhD in Physics at Oregon State University.

Tyler is currently a fourth year graduate student working with Dr. Davide Lazzati on understanding the most powerful explosions in the Universe known as Gamma Ray Bursts. These events are so energetic that in the first few seconds of the explosion, they release more energy than our sun will emit in its entire lifetime. Understanding these events allows us to get a better handle on how matter behaves in extreme conditions and may eventually lead to using these Gamma Ray Bursts as tools that can uncover new cosmological truths.

Besides working on his research project, Tyler is the president and co-founder fo the OSU astronomy Club. The club is focused on fostering interest in astronomy at OSU and the community of Corvallis in general. Tyler, with the help of many other undergraduate and graduate students, has hosted the Astronomy Open House events where members fo the public are invited to Weniger Hall to learn about astronomy though interactive demos and rooftop observations. More information regarding OSU Astronomy can be found at: https://physics.oregonstate.edu/astronomy-club

Graduate Student Jihan Kim has won the 2018 Physics Department Graduate Research Award

Jihan Kim in the lab

Jihan Kim works with Prof. Bo Sun on biophysical problems. Jihan’s research focuses on the mechanics of cancer-extra-cellular medium (ECM) interactions, which is one of the major factors dictating the physiology of tumors. This is a particularly fertile ground for interdisciplinary research, as physicists are  trained to analyze forces in complex systems. Jihan takes advantage of his physics knowledge in understanding deep biological questions.

Jihan’s first project is to measure the force exerted by cancer cells in 3D collagen matrices, which simulate a realistic tissue environment. He quickly learned MATLAB programing, and wrote a sophisticated image analysis algorithm to enhance images, and to determine the 3D deformation field caused by cancer cells. After publishing his first paper in PLoS ONE, Jihan noticed that a pair of cancer cells can permanently remodel a collagen matrix by creating a bundle of concentrated collagen fibers between them. He talked to a friend during the APS meeting about the observation, which eventually evolved into a collaborative project published in Nature Communications.

Having studied the forces generated by cancer cells and how these forces modify the cells’ environment, Jihan is working on his latest project. In this project, he studies how the environment direct cancer migration. Once completed, his PhD thesis will have a completed loop indicating the feedback between cancer cells and their physical environment.

A belated post from last Fall:

Ethan Minot, associate professor of physics, received the Milton Harris Award in Basic Research for his impressive accomplishments as a scientist. At Oregon State, Minot has built a world-class materials physics laboratory for the study of the structure and properties of carbon nanomaterials and devices for nanoelectronics.

Ethan Minot (center) receiving the award with Prof. Janet Tate (left) and Dean Roy Haggerty (right).

His research at Oregon State has pushed the limit of fundamental properties of nanoelectronic devices, which have a broad range of applications to biosensing and solar energy harvesting. Some of his achievements are: identifying the fundamental noise mechanism that limits the performance of graphene biosensors in liquid environments; becoming the first to electrically generate and detect single point defects; reaching a new level of control over point defect chemistry; and other pioneering advances in the development of high-quality nanodevices and biosensors.

Reposted from http://impact.oregonstate.edu/2018/10/recognizing-research-and-administrative-excellence/

Scanning electron micrograph of a carbon nanotube (white filament) connecting metal electrodes (shaded yellow).

Reposted from impact.science.oregonstate.edu

A senior’s gut decision in high school to major in physics holds steady four years later

Looking back on his gut decision in high school to major in physics after taking a class in it, graduating senior Abe Teklu remains somewhat mystified. “I guess I was just really confident,” he laughs.
Abe grew up around numbers and changing locations, moving from Ethiopia to Arizona at age six when his father got an engineering job at Intel, and then moving to Colorado before his family settled outside of Portland when he was 12.
His family is mathematically inclined. His mom is an accountant and his dad, who not so secretly yearned to be a mathematician, is an engineer who reads calculus books and earned a master’s degree in fluid dynamics. This home field advantage explains some of Abe’s youthful confidence (he “loved math” even as a child) but since then Abe has carried the ball all on his own.
At Oregon State as an Honors physics student, Abe has remained confident – at least most of the time – as well as comfortable with numbers and shifting contexts. He has had three research internships. The first was the summer after his sophomore year when he had a paid internship at Northwestern University’s Center for Interdisciplinary Exploration and Research in Astrophysics (CIERA) in Evanston, Illinois, in a rather niche but fascinating area of speculative research called astrobiology. There Abe analyzed mathematical models of theoretical predator-prey systems not limited to planet Earth.
The summer before his junior year, Abe headed down to San Diego for another paid internship, this time at the U.S. Department of Energy’s DIII-D National Fusion Facility. The facilty consists of a tokamak, a magnetic fusion device which Abe describes as “a big metal donut spinning plasma to get fusion energy.” Abe used magnetohydrodynamics (MHD) theory to model plasma confinement, with the goal of understanding which conditions better spread heat flux in the divertor region.
In his third research experience, Abe spent more than two years working in physics department head Heidi Schellman’s Particle Physics Research Group, analyzing neutrino-antineutrino data as part of the MINERvA, a major international research effort exploring matter-antimatter differences in neutrino physics. This involved aiming a beam of neutrinos from Illinois to South Dakota. Specifically, Abe worked on the recoil energies recorded when the rare neutrino-antineutrino reactions hit parallel strips of the scintillator, each of which is connected to a photomultiplier tube that determines how much energy is deposited in a strip.
Abe’s research experiences beyond the classroom gave him many advantages. For one, the DIII-D fusion internship formed the basis for his senior thesis. He also learned valuable lessons about the nature of scientific work.
“Unlike class, where there is always an answer, research is open-ended. It was difficult for me at first, but I came to appreciate that even if you don’t solve a problem, you are contributing to a much larger research effort with scientists around the world that will one day lead to a solution.”
Throughout his four years at OSU, community and relationships were key to Abe’s success, a sentiment reflected in his two top pieces of advice for new students.
“Have as much fun as you can freshman year. Talk toeveryone. You will have the most free time this year and so it’s a great time to meet new people and make friends. It gets harder after that.”
As an Honors College freshman, Abe enjoyed meeting friends in his dorm, Cauthorne, and also hung out in West so often that he was mistaken as a resident. He was and is “surprised by the amount of really smart people here. So many amazing people – and it’s so cool now to see all of my friends going off to exciting new destinations next year, from MIT to Brown to AI research!”
His second piece of advice?
“Talk to professors. Go to office hours. Not just to talk about academics, but just to talk about life. It’s helped me out a lot.”
Some of his favorite professors to hang out with are physicists Corinne Monogue, who he calls a “great teacher and person to talk to about anything at all” and Heidi Schellman. Abe suggests another good reason to talk with professors:  It’s a “great way to start research sooner.”
To wit, when Abe visited to Schellman during her office hours, she began describing her research and Abe just jumped in and asked if he could help.
“That day she gave me a key to her lab and I started doing research!” Two years later, Abe still has a coveted seat in Schellman’s Lab and is currently mentoring a new student to take his place after graduation.
Despite his success at OSU, Abe has faced his share of rejection and challenging times. Before joining the Schellman Lab, he was turned down as a freshman for research positions. The fall of his senior year was a really difficult time. After an intense summer working at the fusion facility DIII-D in San Diego, he returned to campus for a nonstop term which on top of his usual demanding coursework included studying for the Physics GRE, applying to graduate schools, writing his senior thesis and dealing with the inevitable “personal stuff.”
“I was overwhelmed and my confidence was shaken. Was I good enough? I had imposter syndrome. The only thing that got me out of it,” Abe reflects, “was just to endure. I just kept going step by step, every single day. I had to keep going and I did and it finally got better.”
It certainly did. Abe was accepted into the physics Ph.D. program at Stonybrook University in Long Island, New York, remarking with great enthusiasm upon the fact that there are no less than “60-70 physics researchers there!” Not wasting any time, he will jumpstart his graduate research this summer at CERN in Geneva, Switzerland, working on a yet-to-be-defined research project with his graduate advisor.
Abe is grateful for the science education he has received at Oregon State and was not surprised when he heard that the Department of Physics recently received a national award for improving undergraduate physics education.
“All of my professors were great,” he said. The junior-year Paradigms in Physics series in particular, which was redesigned to include interactive pedagogies and real-world applications to better reflect how professional physicists think, was a real game-changer for Abe.
“[The junior-year Paradigms in Physics] was hard, but it was great and everyone in the class bonded together. We came out feeling that we could do anything!”
Abe’s gratitude extends to the many scholarships he received that helped cement his choice to go to Oregon State. He received the university’s four-year Academic Achievement award as well as a freshman year Honors College scholarship, a Kenneth S. Krane Scholarship in Physics and a David B. Nicodemus Scholarship in Physics.

The Ostroverkhova group’s work on bee vision had attracted a lot of attention!

Ostroverkhova et al examined responses of wild bees to traps designed to selectively stimulate either the blue or the green photoreceptor using sunlight-induced fluorescence in the 420-480 nm or 510-540 nm region. Image credit: Rebekka D.

KATU has an interview with Oksana Ostroverkhova at: https://katu.com/news/local/wild-bees-are-attracted-to-blue-fluorescent-light-oregon-state-university-research-finds

Sci-news has an article http://www.sci-news.com/biology/bees-blue-fluorescent-light-06121.html

and there is a press release to go with their recent paper in Journal of Comparative Physiology A. https://link.springer.com/article/10.1007/s00359-018-1269-x

CORVALLIS, Ore. – Researchers at Oregon State University have learned that a specific wavelength range of blue fluorescent light set bees abuzz.

The research is important because bees have a nearly $15 billion dollar impact on the U.S. economy – almost 100 commercial crops would vanish without bees to transfer the pollen grains needed for reproduction.

“The blue fluorescence just triggered a crazy response in the bees, told them they must go to it,” said the study’s corresponding author, Oksana Ostroverkhova. “It’s not just their vision, it’s something behavioral that drives them.”

The findings are a powerful tool for assessing and manipulating bee populations – such as, for example, if a farmer needed to attract large numbers of bees for a couple of weeks to get his or her crop pollinated.

“Blue is broad enough wavelength-wise that we needed to figure out if it mattered to the bees if the light emitted by the sunlight-illuminated trap was more toward the purple end or the green end, and yes, it mattered,” Ostroverkhova said. “What’s also important is now we’ve created traps ourselves using stage lighting filters and fluorescent paint – we’re not just reliant on whatever traps come in a box. We’ve learned how to use commercially available materials to create something that’s very deployable.”

Fluorescent light is what’s seen when a fluorescent substance absorbs ultraviolet rays or some other type of lower-wavelength radiation and then immediately emits it as higher-wavelength visible light – think about a poster whose ink glows when hit by the UV rays of a blacklight.

Like humans, bees have “trichromatic” vision: They have three types of photoreceptors in their eyes.

Both people and bees have blue and green receptors, but the third type for people is red while the third kind for bees is ultraviolet – electromagnetic energy of a lower wavelength that’s just outside the range of human vision.

Flowers’ vibrant colors and patterns – some of them detectable only with UV sight – are a way of helping pollinators like bees find nectar, a sugar-rich fluid produced by plants. Bees get energy from nectar and protein from pollen, and in the process of seeking food they transfer pollen from a flower’s male anther to its female stigma.

Building on her earlier research, Ostroverkhova, a physicist in OSU’s College of Science, set out to determine if green fluorescence, like blue, was attractive to bees. She also wanted to learn whether all wavelengths of blue fluorescence were equally attractive, or if the drawing power tended toward the green or violet edge of the blue range.

In field conditions that provided the opportunity to use wild bees of a variety of species – most bee-vision studies have been done in labs and used captive-reared honeybees – Ostroverkhova designed a collection of bee traps – some non-fluorescent, others fluorescent via sunlight – that her entomology collaborators set up in the field.

Under varying conditions with a diverse set of landscape background colors, blue fluorescent traps proved the most popular by a landslide.

Researchers examined responses to traps designed to selectively stimulate either the blue or the green photoreceptor using sunlight-induced fluorescence with wavelengths of 420 to 480 nanometers and 510 to 540 nanometers, respectively.

They found out that selective excitation of the green photoreceptor type was not attractive, in contrast to that of the blue.

“And when we selectively highlighted the blue photoreceptor type, we learned the bees preferred blue fluorescence in the 430- to 480-nanometer range over that in the 400-420 region,” Ostroverkhova said.

Findings were recently published in the Journal of Comparative Physiology A. The Agricultural Research Foundation and OSU supported this research.

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Editor’s note: Images are available at http://bit.ly/2JO7ypl and http://bit.ly/2MA4080

Jim Ketter at a Dept. Picnic, photo by Randall Milstein

Jim Ketter, who served as lab guru and instructor for many years, passed away on June 6th 2018. Jim joined our department in 2005 after a varied career as a geophysicist, high school teacher, graduate student and physics instructor at LBCC and Oregon State.  He was a warm and sensitive instructor and the go-to gadget guy who kept our labs running and our department presentable. In addition to the considerable load of teaching and keeping our labs humming, he loved doing outreach – Discovery days, supervising the SPS and generally bringing his enthusiasm for physics to everyone he met.

There will be a  celebration of life for Jim on July 14th from 2pm-5pm at Deluxe Brewing: 635 NE Water Ave. Albany, Oregon.

http://www.fisherfuneralhome.com/obituary/Jim-Ketter/Albany-Oregon/1802004

has more details and an obituary.

His family requests that donations in his memory go to Albany Parks and Recreation Foundation in lieu of flowers.

The Ostraverkhova group’s work on xylindein, an organic semiconductor produced naturally by fungi, has been featured in a press release.

http://today.oregonstate.edu/news/fungi-produced-pigment-shows-promise-semiconductor-material

June 5, 2018
CORVALLIS, Ore. – Researchers at Oregon State University are looking at a highly durable organic pigment, used by humans in artwork for hundreds of years, as a promising possibility as a semiconductor material.
Findings suggest it could become a sustainable, low-cost, easily fabricated alternative to silicon in electronic or optoelectronic applications where the high-performance capabilities of silicon aren’t required.
Optoelectronics is technology working with the combined use of light and electronics, such as solar cells, and the pigment being studied is xylindein.
“Xylindein is pretty, but can it also be useful? How much can we squeeze out of it?” said Oregon State University physicist Oksana Ostroverkhova. “It functions as an electronic material but not a great one, but there’s optimism we can make it better.”
Xylindien is secreted by two wood-eating fungi in the Chlorociboria genus. Any wood that’s infected by the fungi is stained a blue-green color, and artisans have prized xylindein-affected wood for centuries.
The pigment is so stable that decorative products made half a millennium ago still exhibit its distinctive hue. It holds up against prolonged exposure to heat, ultraviolet light and electrical stress.
“If we can learn the secret for why those fungi-produced pigments are so stable, we could solve a problem that exists with organic electronics,” Ostroverkhova said. “Also, many organic electronic materials are too expensive to produce, so we’re looking to do something inexpensively in an ecologically friendly way that’s good for the economy.”
With current fabrication techniques, xylindein tends to form non-uniform films with a porous, irregular, “rocky” structure.
“There’s a lot of performance variation,” she said. “You can tinker with it in the lab, but you can’t really make a technologically relevant device out of it on a large scale. But we found a way to make it more easily processed and to get a decent film quality.”
Ostroverkhova and collaborators in OSU’s colleges of Science and Forestry blended xylindein with a transparent, non-conductive polymer, poly(methyl methacrylate), abbreviated to PMMA and sometimes known as acrylic glass. They drop-cast solutions both of pristine xylindein and a xlyindein-PMMA blend onto electrodes on a glass substrate for testing.
They found the non-conducting polymer greatly improved the film structure without a detrimental effect on xylindein’s electrical properties. And the blended films actually showed better photosensitivity.
“Exactly why that happened, and its potential value in solar cells, is something we’ll be investigating in future research,” Ostroverkhova said. “We’ll also look into replacing the polymer with a natural product – something sustainable made from cellulose. We could grow the pigment from the cellulose and be able to make a device that’s all ready to go.
“Xylindein will never beat silicon, but for many applications, it doesn’t need to beat silicon,” she said. “It could work well for depositing onto large, flexible substrates, like for making wearable electronics.”
This research, whose findings were recently published in MRS Advances, represents the first use of a fungus-produced material in a thin-film electrical device.
“And there are a lot more of the materials,” Ostroverkhova said. “This is just first one we’ve explored. It could be the beginning of a whole new class of organic electronic materials.”
The National Science Foundation supported this research.
About the OSU College of Science:  As one of the largest academic units at OSU, the College of Science has seven departments and 12 pre-professional programs. It provides the basic science courses essential to the education of every OSU student, builds future leaders in science, and its faculty are international leaders in scientific research.