This is an Oregon State University press release from 5-8-15 that shares about the collaborative research project of Project 1 and Core C – Biostatistics and Modeling.

– By Gail Wells, 541-737-1386, gail.wells@oregonstate.edu, on Twitter @OregonStateExt
Source: Susan Tilton, 541-737-1740, susan.tilton@oregonstate.edu
http://bit.ly/OSU_AgNews1542

CORVALLIS, Ore. – Scientists at Oregon State University have developed a faster, more accurate method to assess cancer risk from certain common environmental pollutants.

Researchers found that they could analyze the immediate genetic responses of the skin cells of exposed mice and apply statistical approaches to determine whether or not those cells would eventually become cancerous.

The study focused on an important class of pollutants known as polycyclic aromatic hydrocarbons, or PAHs, that commonly occur in the environment as mixtures such as diesel exhaust and cigarette smoke.

Dr. Susan Tilton
Dr. Susan Tilton

“After only 12 hours, we could predict the ability of certain PAH mixtures to cause cancer, rather than waiting 25 weeks for tumors to develop,” said Susan Tilton, an environmental toxicologist with OSU’s College of Agricultural Sciences.

For at least some PAH mixtures, the new method is not only quicker but produces more accurate cancer-risk assessments than are currently possible, she said.

“Our work was intended as a proof of concept,” said Tilton, who is also affiliated with the OSU’s multidisciplinary Superfund Research Program, a center funded by the National Institute of Environmental Health Sciences (NIEHS).

“The method needs to be tested with a larger group of chemicals and mixtures. But we now have a model that we can use to develop larger-scale screening tests with human cells in a laboratory dish.”

Such a method will be particularly useful for screening PAHs, a large class of pollutants that result from combustion of organic matter and fossil fuels. PAHs are widespread contaminants of air, water and soil. There are hundreds of different kinds, and some are known carcinogens, but many have not been tested.

Humans are primarily exposed to PAHs in the environment as mixtures, which makes it harder to assess their cancer risk. The standard calculation, Tilton said, is to identify the risk of each element in the mix – if it’s known – and add them together.

But this method doesn’t work with most PAH mixes. It assumes the risk for each component is known, as well as which components are in a given mix. Often that information is not available.

This study examined three PAH mixtures that are common in the environment – coal tar, diesel exhaust and cigarette smoke – and various mixtures of them.

They found that each substance touched off a rapid and distinctive cascade of biological and metabolic changes in the skin cells of a mouse. The response amounted to a unique “fingerprint” of the genetic changes that occur as cells reacted to exposure to each chemical.

By matching patterns of genetic changes known to occur as cells become cancerous, they found that some of the cellular responses were early indicators of developing cancers. They also found that the standard method to calculate carcinogenic material underestimated the cancer risk of some mixtures and overestimated the combined risk of others.

“Our study is a first step in moving away from risk assessments based on individual components of these PAH mixtures and developing more accurate methods that look at the mixture as a whole,” Tilton said. “We’re hoping to bring the methodology to the point where we no longer need to use tumors as our endpoint.”

Tilton collaborated on the research with Katrina Waters of the Pacific Northwest National Laboratory, and others. Their findings appeared in a recent edition of Toxicological Sciences.

The study was funded by NIEHS, which supports the Superfund Research Program, a multi-partner collaboration that includes OSU and PNNL.

Hi! My name is Cleo Davie-Martin, and I am a recent arrival from Dunedin, New Zealand. I am a new Post-doctoral Scholar in the Department of Environmental and Molecular Toxicology at Oregon State University working with Dr. Staci Simonich under Project 5 of the SRP.

Cleo Davie-Martin
Cleo Davie-Martin, PostDoc, Project 5

I obtained my B.Sc.(Hons) in chemistry and more recently, my Ph.D. in environmental and analytical chemistry from the University of Otago under the supervision of Dr. Kimberly Hageman and Dr. Yu-Ping Chin. My research investigated the local- and global-scale atmospheric distribution of organic contaminants, including pesticides and brominated flame retardants.

On my weekends, you are likely to find me backpacking through the mountains, camping under the stars, and/or exploring the coast (and when this beautiful weather ends… perhaps indoors on the climbing wall or playing badminton and squash).

blair teaching mcnary 2
Blair Paulik discussing toxicology in the classroom

Blair Paulik and Jamie Minick, both SRP Trainees working on their PhDs in Dr. Kim Anderson’s lab (Project 4), traveled to McNary High School in the Salem, OR area on April 10th to teach students about environmental pollution.

This opportunity was initiated when a teacher from McNary contacted the Community Outreach & Engagement Core of the Environmental Health Sciences Center (EHSC). The opportunity was then given to the Department of Environmental & Molecular Toxicology’s graduate student organization, TEAM Tox. This is a great way for grad students to get out into classrooms.

Blair and Jamie’s interactive presentation highlighted where environmental pollution comes from, why environmental pollution is of concern, how humans are exposed to pollutants, and how scientists at Oregon State University are studying pollutants in the environment.

Jamie Minick presenting on environmental pollutants.
Jamie Minick presenting on environmental pollutants.

Throughout the day, Blair and Jamie taught 129 high school students from six different classes including chemistry, biology, and environmental science. The students showed genuine interest in the subject matter, asking questions about specific environmental pollutants and about science and college in general.

Chemistry graduate student Ivan Titaley has been immersed in polycyclic aromatic hydrocarbon (PAH) research within SRP Project 5 – Formation of Hazardous PAH Breakdown Products in Complex Environmental Mixtures at Superfund Sites under Dr. Staci Simonich.

Ivan Titaley
Ivan Titaley

Recently, Ivan was selected by Dr. Dayle Smith as a sponsored fellow at the Pacific Northwest National Laboratory (PNNL) to get hands-on training in modeling of polycyclic aromatic hydrocarbons. This program is through the Office of Science and Engineering Education (SEE) at PNNL. The selection is commendable, and will allow Ivan to apply new modeling techniquesl in his own research on OPAHs and OHPAHs transformation processes.

To financially support Ivan on this unique training opportunity, he has been awarded an SRP Trainee Externship Award through the SRP Training Core. This activity provides important synergy between Project 5 and Core C – Biostatistics and Modeling.

Dr. Smith will provide mentoring for Ivan to perform computational chemistry work to predict the formation of oxygenated-PAHs (OPAHs) and hydroxy-PAHs (OHPAHs) from higher molecular weight parent PAHs. More specifically, Ivan will be working using the NWChem 6.5 computational chemistry software. Using thermodynamic data on potential OH-PAH-adduct, he will be able to show which compounds will form based on thermodynamic stability.

Congratulations, Ivan!

 

Holly
Holly Dixon

My name is Holly Dixon, and I am a new PhD student in the Dept. of Environmental and Molecular Toxicology (EMT) at Oregon State University (OSU). I grew up in Lake Oswego, Oregon and completed my undergraduate degree in Biology at the University of Puget Sound in Tacoma, Washington in 2014.

During my undergraduate career, I had the opportunity to complete a nuclear forensics internship at the Los Alamos National Laboratory (LANL) and a chemical mixtures internship at the Pacific Northwest National Laboratory (PNNL) through the U.S. Department of Homeland Security. By completing summer internships, I not only discovered that the field of toxicology is the perfect blend of my biology, chemistry, and research interests, but also that one of my career goals is to better understand people’s environmental exposure to toxicants.

I am excited by all of the opportunities I have had at OSU so far – both in my classes and research. I cannot wait to gain more specialized knowledge in toxicology and take part in a long-term research project.  Through the EMT program’s supportive and motivated environment, I know I will grow as a student, researcher, and collaborator.   I am currently working in Dr. Kim Anderson’s lab and learning about her different SRP projects (Project 4).

Recently I had the privilege of being recognized as an OSU ARCS Scholar. This award is for a new PhD student in the College of Agricultural Sciences. As an ARCS Scholar, I receive a stipend for three years to support my graduate studies.

Outside of studying and conducting research, I enjoy playing tennis and exploring the Pacific Northwest. I look forward to spending the next few years in Corvallis.