Tag Archives: Sea Grant

Starting out as Malouf Scholar, ODFW Marine Team, and deep-sea research on the Okeanos

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Every day I get to go out on the Ocean I feel like the luckiest person in the world!

I was in Portland OR, attending the Ecological Society of America (ESA) meeting, when I first heard the good news that I had gotten the Malouf Marine Studies Scholarship! I could not believe it, and was so exited. I ran all over the Oregon Convention Center, trying to find my adviser to tell him the good news! I finally had the funding to start doing field work and begin my PhD research.

During September I had my first chance to go out with Oregon Department of Fish and Wildlife (ODFW) Marine Reserves Team, and learn how their Hook and Line survey methods works. A method I plan to use as part of my research.  I learned so much those few days I was out there with ODFW’s David Wagman (also known as Wolfe, bottom left). He is a really good mentor and gave me great suggestions on how to improve my proposed research.

Photos: Alex Avila, Participating in ODFW’s Hook and Line Surveys

Photo: Alex Avila. Wolfe measuring fish

Unfortunately that was the last outing of the season. I need to finish writing all my permit application in the winter in order to be ready to hit the ground running next year.

NOAA scholarships have given me the opportunities I would have never even dream possible. Just like Oregon Sea Grant is part of NOAA Sea Grant College program , so is another scholarship that has greatly impacted my life, the Dr. Nancy Foster Scholarship, from NOAA’s Office of National Marine Sanctuaries. I’m currently serving aboard the NOAA ship Okeanos in the Gulf of Mexico, as part of a program collaboration opportunity that was given to me as a Dr. Nancy Foster scholar. I’m here to serve as in data logging and samples processing. At the end of the expedition I will be writing a report that will help prioritize data for researchers, ensuring that the data can be efficiently used.

Photo courtesy of NOAA Office of Exploration and Research (OER)

Photo courtesy of NOAA Office of Exploration and Research (OER)

The  NOAA Ship Okeanos Explorer expedition is running from November 29 through December 21 2017, and is investigating deep-sea habitats and the associated marine communities in the Gulf of Mexico basin. Through the Okeanos expedition,  other researchers and I, are exploring and discovering vulnerable marine habitats and investigating areas relevant to resource managers, submerged cultural heritage sites,  and marine protected areas. Okeanos is equipped with telepresence, meaning people on shore – whether scientists or the general public – and anyone can watch the remotely operated vehicle (ROVs) dives live in real time (click here to stream video).  In fact, next week, we will be conducting a Facebook Live event from the NOAA Ship Okeanos Explorer in the Gulf of Mexico this Tuesday, December 12th 2017 at 11:00 am PST  (2:00 pm EST). Science Co-lead Dr. Diva Amon, Expedition Coordinator Brian Kennedy, and I will be there to answer everyone questions! Check out Diva’s, NOAA’s OER and my twitter profiles for daily updates from the Okeanos!

Left to right: Diva Amon, Brian Kennedy, Alex Avila. Photo courtesy of NOAA Office of Exploration and Research (OER)

 

 

New Age in Newport

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As a transplant from Monterey, CA I was definitely excited to return to a scenic coastal town after living in the Bay Area for four years. Over the past year I spent every free weekend traveling back and forth between the city and the California’s Central Valley, so getting to stay in one place for two months sounded like a treat. Bonus points for the tall trees and windy beaches, us NorCal kids don’t expect to do much swimming anyway.

My first day on the job I drove out to Salem with my mentor, Meg, and quite frankly chatted her ear off. In the Salem office I met a good amount of the Department of Land Conservation and Development staff and all of them seemed to take interest in my project. A few of them also had some hand in it over the years and I believe they were excited to see where I could take it being that it is my main focus during my time here.

Beauty of the bridge.

The official title of my project is the Oregon King Tides Photo Initiative. This project is actually an international initiative dependent on citizen science. Coastal communities around the world are asked to take pictures of “King Tides”, or the highest tides of the year, and standard high tides for comparison. This helps coastal management organizations visualize and plan for the ways in which these communities may be affected by sea level rise. Newport is a prime location to witness the King Tides in the winter and is where I’ll be working for the next 10 weeks.

Although a lot of my work involves sorting through photos and developing ways to discuss the importance of this project, I will have the chance to do some field work! Many of the photos sent in do not include the “normal” high tides comparison shots. Throughout the summer I will travel up and down the coast a few times to make sure we gather the missing pieces and develop a clear message about why this project matters.

Drew some inspiration from past posters, but still proud!

My first week was mostly full of correcting the photos uploaded to the Flickr page that had missing or scrambled information. Meg had mentioned that most of the participants were from *much* older generations… and it showed just a bit. One of my own goals this summer is to help Meg create a stronger social media platform for the project so people of all ages are informed and start to get involved (follow @oregonkingtides on Instagram!). Social media has be become an incredible marketing tool in the last 5 years and I see so much potential in it. If used correctly, projects like this and others that depend on citizen science can truly gain massive numbers of dedicated participants and continue to educate the public on why the issue of our rapidly-changing planet is important.

My favorite part of the week was getting to do some graphic design work for posters being used at an upcoming beach bash. This project has so many great opportunities for me to be creative. I also feel obligated to learn as much as I can about photography which has really helped get me outside to explore and take some photos.

Tell them Meagan sent ya

On my lunch breaks I usually grab a Dutch Bros (they are a true delicacy in California!) and head to the beach to play around with my camera. I’m hoping I’ll soon be contacted by Dutch Bros offering me a large sum for advertising their coffee so well.

Lastly, I found both a gym and a natural foods store where I can lift weights and purchase my favorite vegan snacks. My personal goal is to hit a couple personal records while I’m here and try some new recipes out on my roommates. If anyone misses work due to food poisoning that’s probably my fault, apologies in advance! Newport may be small but it’s full of kind and passionate people. Cheers to week one and embarking on a new adventure.

It took me five minutes to figure out how to set the exposure on my camera to take this picture but I’d say it was worth it!

Finding a Love for the Waves

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You can’t live in the Pacific Northwest having never surfed. Okay, so it’s not really like that. But most days, you’ll find the beaches here packed with surfers either on their pre-work wave riding routine, taking a quick “lunch break,” or catching the evening swell before the sun sets. If there’s any truth to the statement above, I guess I can leave here with the pride of an Oregonian.

Waves breaking at sunset. Photo: Justin Dalaba.

Since a young age, I’ve always loved watching waves and felt drawn to them, but until now I never really had a means of riding one. Having a surfboard might have helped, but there’s a difference between learning to surf and putting yourself at the mercy of a big breaker with no clue how to either escape or ride the wave. Fortunately, living within walking distance of popular surf spots this summer made my goal of learning to surf much more attainable.

Jess Vaccare (left), our instructor (middle) and myself (right) heading out to surf. Photo: Skyler Elmstrom.

There are two things you learn right away about surfing the central coast of Oregon. First, the water is cold. And that pretty much never changes. It helps coming from a background of coldwater diving, but you’re still never really prepared for when that first wave breaks over your head, sending brisk seawater down your wetsuit. Second, expect the conditions to change pretty quickly at any point in the day. It rains basically half the year here and the accompanying wind and fog can be just as enduring. I learned how brutal paddling into the wind and waves can be during my second surf session when a sunny day was quickly consumed by wind and fog. So if numb hands and salty eyes don’t bother you, this is the place to surf.

Post-surf stoke. Photo: Skyler Elmstrom.

The hardest part about surfing (from a beginner’s perspective) is getting yourself in the water and learning to read the ocean. You can really wear yourself out quickly by paddling into waves and trying to get up on every one that looks worthy of riding, but if you’re patient and wait for the right one, there’s nothing that compares to the feeling of being on your feet with gravity in your favor. For me, that lucky wave came on my second attempt. Something just felt right as I rotated around, took a few long strokes and felt the surge of water tip my board down. Once I got into my stance, it was almost effortless as I let the wave do most of the work.

Evening swell on the Oregon coast.

I was stoked. All of my irrational fears about failing and tumbling down the wave had vanished. From now on, I’ll probably always associate surfing with my first experience here on the Oregon coast. I couldn’t think of a better setting with better people to surf with. But I think half the fun of surfing is finding new places and new buddies who can share their experiences with you. I don’t think this was just another bucket list item for me; rather this will be another outlet for me to explore what’s out there before it’s gone. Our ocean is such a great resource in many ways and in order to conserve it, we first have to appreciate it and find a love for it.

Week 4: Self-Directed Accomplishment

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This week I was supposed to be on a trip with my lab in Willapa Bay, Washington, doing field work. My foot is not healed enough that I was comfortable to go, so I had to sit this one out. I was able to go to the doctor and get an x-ray and my pinky toe is definitely fractured. This means another month of healing, which is basically my whole summer. The silver lining of the situation is that my injury lined up nicely with my move to a new house, allowing me to take it easy while still getting things done, like unpacking and getting settled. My injury means that I had to miss out on the fun and the other people in the lab have to do a lot more work to do, but we’re trying to make the best of it. I should be able to go on the next one though, which leaves this upcoming Friday!

Although I can’t go in the field, I have still been useful doing computer and lab work, which I had a lot of this week. My mentor wanted to give me something hands-on to do, so instead of processing some samples in the field like they normally would do, they brought them back in Ziploc bags so I could process them in the lab. These samples were from the mud and eelgrass areas near some bags of oyster shells that were put out a couple months ago, when Dungeness crabs were recruiting (metamorphosing from larvae into juveniles). The oyster shells create three-dimensional habitat at low tide, attracting crabs seeking shelter and providing suitable habitat for . We periodically sample the bags and some of the sediment underneath, as well as areas nearby with no bags, to look at the number and size of any crabs we find, which are mainly Dungeness (Metacarcinus magister) and shore crabs (Hemigrapsus spp.). This data helps my mentor look at the recruitment and growth of juvenile Dungeness, as well as their preferred habitats. In the lab, I sorted bags of eelgrass, measuring crabs I found and weighing the eelgrass both wet and after drying in an oven.

Because everyone was gone this week, I was responsible for my own success in getting things done, but I think I did a very good job. It helps that I am so used to being in school, where you set your own schedule. I’ve learned a lot of time management, and it’s good to know that this helps in the real world too!

I’m not sure what this next week has in store for me, but I’m definitely looking forward to going to Washington on Friday!

Third Week’s The Charm!

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Hello again!

With the holiday weekend over I must say I’m exhausted. I’m not sure where the week went! This past week at the ODFW was all about starting up our annual red rock crab surveys. Monday, Jim and I set eight crab pots off the docks of the small boat basin of Coos Bay. We filled them with leftover fish fillets thrown away by fishermen and boy, did they smell gnarly! We let them soak overnight and have been checking them daily in the mornings.

Past surveys have shown that basin is comprised of mainly Dungeness and red rock crabs. We have been measuring the carapace length and taking weights of whole (no appendages missing) Dungeness crabs. For red rock crabs we have quite the laundry list of tasks to perform and data to collect. Red rock crabs are weighed, carapace length is measured, and we check and account for missing appendages and determine the sex of the crab. We then tag the crab with a t-bar tag that includes an individual identification number that we can use for mark-recapture studies. We also clip the eighth carapace spine on the right-hand side to help compensate for tag loss. If a crab is a recapture we note that as well. Flyers are posted around the boat basin that encourages people to call in recreational recaptured red rock crabs with incentive of a prize. This is done to monitor removal of red rock crabs from the small boat basin. We hope to use this annual project to predict red rock population size and variability over years, as well as to monitor and analyze red rock crab recruitment.

My mentor's sense of humor always keeps me on my toes!

My mentor’s sense of humor always keeps me on my toes!

And let me tell you, if you have never handled a crab you are in for a surprise. Watching my mentor work up crabs made it all seem very easy and effortless, but in reality there is an art to avoiding being pinched. Dungeness crabs will make your extremities sting for a short while, but get your hand caught in the grips of red rock chelae and you are in for a painful crush. However, I am slowly trying to master the art.

This week we also had the day off for the Fourth of July. OIMB held a lovely picnic overlooking the ocean on Cape Arago. The food was amazing: grilled oysters, BBQ tuna, hotdogs, and endless desserts. A few friends and I headed over to South Cove after lunch where we were lucky enough to spy a grey whale swimming fairly close to shore. We also found a washed up juvenile salmon shark with quite the chunk taken out of his left side. In the evening, we hiked down to Pirate’s Cove where we sat up on the rock faces that overlooked Bastendorf Beach and watched the locals set off some impressive fireworks.

Hiking up and down to get to Pirate's Cove: no easy feat!

Hiking up and down to get to Pirate’s Cove: no easy feat!

In addition to the fun of field work and number crunching, I like to try something new each week. This week my friend, Jaron, taught me how to long board. My balance was great but my coordination was what onlookers could call, well, “lacking”. But after a couple hours I was zooming around without falling, a success in my books! It was so much fun and I am definitely going to continue practicing.

Each week here brings so much excitement! Can’t wait to see what this week has in store!

Long boarding for the first time

Long boarding for the first time

Week 3: Happy Fourth of July

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This week of my internship turned out to be quite short. Because of an unfortunate accident over the previous weekend, my foot might be broken, (a week later, it is feeling much better and I can almost walk normally but I am still not able to do field work), so I missed Monday to go to the doctor and rest up. The Fourth of July and the following EPA furlough day gave me a four-day weekend. I guess it was great timing, because I was able to rest up plenty and relax but still have fun. My friends hosted a BBQ at their house, and we all biked down to the Willamette River in Corvallis where there was a fireworks show, as well as hundreds of people lighting off their own in the street. The Fourth is one of my favorite holidays, and although I was not in tip-top shape, it was still a wonderful time.
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Before I hurt my foot, I was able to go tidepooling in Boiler Bay, just north of Newport. I spent three hours there (and consequently got a little sunburned, it was a beautiful day), and had a great time taking pictures, touching things, and trying to catch fish. The Oregon Coast has an amazing diversity of marine life, and I’m so glad I get to experience it!

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To respond to a question from my last post, “testing” the GoPro cameras involved taking pictures and videos, trying to figure out the battery life, size of the SD card, and the size of the field of view at various heights off the ground. I put testing in quotes because it felt more like playing with the cameras. We came up with a design for the mount of the camera and built and deployed it last week to get some test video. It worked surprisingly well the first time, and I learned how to use a drill press. We just bought materials for the rest of the camera mounts, and will be building them soon.
In the meantime, I am continuing my video analysis from previous years so we will have historic data to compare to. I am also sorting through samples of seagrass, measuring any crabs I find and weighing the plant matter, as part of another ongoing project looking at the crabs that live in Yaquina Bay. We are trying to determine where they are most abundant (in the native seagrass, the invasive seagrass, or bare mud), and if the ages of the crabs is different between them.
Hopefully my foot will be better soon so I can get back to field work!

Field Work Frenzy!

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Hello all!
I’m so excited to update you on my week! This past week was all about field work, which is my favorite part of any job. Monday we kicked off the week heading down to Indian Point where Jim, my officemate and colleague, and Scott, my mentor, had previously placed two crab pots filled with pit tagged cockles. Our goal was to dig up the crab pots (no easy feat in such coarse sand!) and retrieve the cockles to measure their growth over the previous two weeks. Unfortunately, many of the cockles had died but we could still collect all the growth data we needed from them, such as shell length, height, fatness, and clam weight.

A typical day at the ODFW in Charleston, OR

Wednesday I had the opportunity to venture outside of shellfish biology and got to ride along and seine with the marine fish department. Our target species was Chinook salmon but we also found many other species of fish such as greenlings, sand lances, English soles, staghorn sculpins, and smelts. We also found hundreds of small Dungeness crabs and comb jellies.  A few people held one end of the seine on the beach and the boat was driven around in an arch until the boat reached the other end of the beach. We then pulled the seine up to the shore and then sifted through the bag for fish.
We sampled 4 sites along a seven mile stretch of water, from Charleston to North Bend. We measured lengths and weights of our target species in order to later be able to calculate a condition factor (K) which is used to estimate the condition (health) of fish. We also identified which salmon were hatchery salmon by checking to see if the adipose fin was clipped. Clipped fins indicated hatchery spawned salmon.

Port Orford

Thursday’s field site in Port Orford

Thursday was by far my favorite field work day of the week. Jim and I drove out to Woodruff Creek near Port Orford. After scaling down a sharp cliff-face in waders to get to our sampling site my adrenaline was definitely pumping. We sampled eight, random, 1m^2 quadrats. Our target species was littleneck clams. Digging through all the tide pools was amazing and we found some cool intertidal species; my favorite find was a clown nudibranch (sea slug). The tide pools were teaming with diverse fauna: several species of crabs, gunnels, peanut worms, sea stars, sculpins, the list goes on and on! Though we were out sampling in the warm sun for three or so hours I enjoyed every minute of lifting cobble and boulders and digging through sand to find littleneck clams. When you love what you do, it never seems like work!

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A clown nudibranch (sea slug) I found in one of our quadrats in Port Orford

And what’s work without a little play? I have made some good friends at the Oregon Institute of Marine Biology (OIMB) where I am being housed. All the students are friendly and always ready for adventures. After dinner, rain or shine, we’ll get together to play volleyball or Frisbee or go hang out on the beach. Thursday was particularly fun, as I swam in the Pacific Ocean for the first time. It took a few minutes to get used to the cold water but soon we were having the time of our lives swimming through the breakers.

volleyball

A typical night at OIMB

This weekend, a few friends and I drove over to Sunset Bay where we spent our day climbing through the cliff sides where we found some pretty stellar tide pools. As the tide began to roll in, so did the fog. The fog is a unique part of the Oregon coast that I have come to love.  In Indiana, fog is something you wake up to and it appears as a boring, thick sheet. Here in Oregon, fog comes in at random times throughout the day and it rolls in looking like thick cumulus clouds gliding across the ground and pouring like falls over cliff sides. It’s a beautiful event that I’ve fallen in love with and there is something very relaxing about the whole occurrence. On our way back to OIMB we stopped at an overlook of the cove and ended up sighting some sea lions and even a whale, which was the cherry on top of a good day. I can’t wait to see what adventures this week holds!