Category Archives: Forest Engineering, Resources, and Management

Stream ecosystems and a changing climate

Examining the effect of climate change on stream ecosystems

Oak Creek near McDonald Dunn research lab. The salamander and trout in the experiments were collected along this stretch of creek.

As a first year Master’s student in the lab of Ivan Arismendi, Francisco Pickens studies how the changing, warming climate impacts animals inhabiting stream ecosystems. A major component of stream ecosystem health is rainfall. In examining and predicting the effects of climate change on rainfall, it is important to consider not only the amount of rainfall, but also the timing of rainfall. Although a stream may receive a consistent amount of rain, the duration of the rainy season is projected to shrink, leading to higher flows earlier in the year and a shift in the timing of the lowest water depth. Currently, low flow and peak summer temperature are separated by time. With the shortening and early arrival of the rainy season, it is more likely that low flow and peak summer temperature will coincide.

A curious trout in one of the experimental tanks.

Francisco is trying to determine how the convergence of these two events will impact the animals inhabiting streams. This is an important question because the animals found in streams are ectothermic, meaning that they rely on their surrounding environment to regulate their body temperature. Synchronization of the peak summer temperature with the lowest level of water flow could raise the temperature of the water, profoundly impacting the physiology of the animals living in these streams.

 

 

How to study animals in stream ecosystems?

Salamander in its terrestrial stage.

Using a simulated stream environment in a controlled lab setting, Francisco studies how temperature and low water depth impact the physiology and behavior of two abundant stream species – cutthroat trout and the pacific giant salamander. Francisco controls the water temperature and depth, with depth serving as a proxy for stream water level.

Blood glucose level serves as the experimental readout for assessing physiological stress because elevated blood glucose is an indicator of stress. Francisco also studies the animals’ behavior in response to changing conditions. Increased speed, distance traveled, and aggressiveness are all indicators of stress. Francisco analyzes their behavior by tracking their movement through video. Manual frame-by-frame video analysis is time consuming for a single researcher, but lends itself well to automation by computer. Francisco is in the process of implementing a computer vision-based tool to track the animals’ movement automatically.

The crew that assisted in helping collect the animals: From left to right: Chris Flora (undergraduate), Lauren Zatkos (Master’s student), Ivan Arismendi (PI).

Why OSU?

Originally from a small town in Washington state, Francisco grew up in a logging community near the woods. He knew he wanted to pursue a career involving wild animals and fishing, with the opportunity to work outside. Francisco came to OSU’s Department of Fisheries and Wildlife for his undergraduate studies. As an undergrad, Francisco had the opportunity to explore research through the NSF REU program while working on a project related to algae in the lab of Brooke Penaluna. After he finishes his Master’s degree at OSU, Francisco would like to continue working as a data scientist in a federal or state agency.

Tune in on Sunday, June 24th at 7pm PST on KBVR Corvallis 88.7 FM, or listen live at kbvr.com/listen.  Also, check us out on Apple Podcasts!

Comunicación Científica con Franco

Kristen Finch interviewing Francisco Guerrero for this special episode. (Photo by Adrian Gallo)

This week on Inspiration Dissemination we will be featuring a previous guest: Francisco Guerrero, a PhD student in the Department of Forest Engineering, Resources, and Management. Francisco’s first interview aired on October 18, 2015, and we called him back for a follow-up because he has been selected for the American Association for the Advancement of Science (AAAS) Mass Media Science and Engineering Fellowship. As a fellow, Franco will be writing feature stories about climate change and health for CNN en Español. Part of the fellowship will involve helping with film production, as well. FUN FACT last time Franco was on the show, he told us that he always wanted to be a movie producer. Franco will take this amazing opportunity during the final push for his PhD research to enhance his science communication skills and gain experience in production and video broadcasting.

This special interview will begin at 6:30 pm on May 6, 2018. We will be asking Franco about the application process, his responsibilities as a fellow, and his goals for the fellowship. After our interview with Franco, we will rebroadcast his first interview on Inspiration Dissemination at 7 pm.

Tune in to KBVR Corvallis 88.7 FM at 6:30 pm to hear about the AAAS Fellowship and learn about Franco’s research in the College of Forestry. Not a local listener? No sweat! Stream the show live on line or hear the podcast next week.

Franco wants to hear from you! Tweet him with ideas for CNN Español, specifically stories about Climate Change and Health. 

The folks behind the episode: Francisco Guerrero, Kristen Finch, and Lillian Padgitt-Cobb. (Photo by Adrian Gallo)

Deciphering the Language of the Universe

3 Minute Thesis Slide

A diagram demonstrating how information in lake sediment can reveal natural history. Courtesy of Francisco Guerrero

Scientists design experiments to answer a specific question, and usually they already have an informed prediction as to what the answer may be. They set up treatments and make measurements of specific variables that they think will contribute information for the understanding of the problem. In natural systems, however, there are innumerable variables that could also be informative for the system. For Francisco Guerrero, a PhD student in the Department of Forest Engineering, Resources, and Management, the leftover material—the unused information—is essential to the understanding of a natural system but may be overlooked by scientists after a specific outcome. Francisco wants to harness all the information in a natural system, identify patterns, and simulate a complete picture of a forest or a watershed. An application of Francisco’s research in the lab of Jeff Hatten utilizes Information Theory to create a mathematical tool that translates that information into a snapshot of a forest ecosystem as it is evolving, allowing scientists to predict where it is headed and past events that have lead to the current state.

Francisco With Soil Sample

Francisco holds a soil sample to be processed in the lab. Courtesy of Francisco Guerrero

Francisco’s academic journey itself has evolved from early dreams of becoming a TV producer to ecologist to engineer. Passionate in his pursuits, our guest this Sunday loves to chase a challenge. To hear about about Francisco’s research and his unique journey, tune in to 88.7 FM KBVR in Corvallis on Sunday, October 18th at 7PM PST, or stream the show live online at http://kbvr.com/listen!