Category Archives: Ocean Ecology and Biogeochemistry

Are Microplastics the New Fish Food?

Geologists have considered an entirely new geologic era as a result of the impact humans are having on the planet. Some plastic material in our oceans near Hawaii along are hot magma vents and is being cemented together with sand, shells, fishing nets and forming never before existing material — Plastiglomerates. This new rock is a geologic marker providing evidence of our impact that will last centuries. Although rocks seem inert, that same plastic material floating around our oceans is constantly being eaten, purposefully and accidentally, by ocean creatures from as small as plankton to as large as whales and we’re just beginning to understand the ubiquity of microplastics in our oceans and food webs that humans depend on.  

Our guest this evening is Katherine Lasdin, a Masters student in the Fisheries and Wildlife Department, and she has to go through extraordinary steps in her lab to measure the quantity and accumulation of plastics in fish. Her work focuses on the area off the coast of Oregon, where she is collecting black rockfish near Oregon Marine Reserves and far away from those protected areas. These Marine Reserves are “living laboratory” zones that do not allow any fishing or development so that long-term monitoring and research can occur to better understand natural ecosystems. Due to the protected nature of these zones, fish may be able to live longer lives compared to fish who are not accessing this reserve. The paradox is whether fish leading longer lives could also allow them to bioaccumulate more plastics in their system compared to fish outside these reserves. But why would fish be eating plastics in the first place? 

These are the locations of Oregon’s Marine Reserves. The sampling for juveniles and adult black rockfish is occurring at Cape Foulweather which is between the Cascade head and Otter Rock Reserves. PC:
Black rockfish are a common fish off the Oregon coast and due to their abundance it’s a great study species for this research.

Plastic bottles, straws, and fishing equipment all eventually degrade into smaller pieces. Either through photodegradation from the sun rays, by wave action physically ripping holes in bottles, or abrasion with rocks as they churn on our beaches. The bottle that was once your laundry detergent  is now a million tiny fragments, some you can see but many you cannot. And they’re not just in our oceans either. As the plastics degrade into even tinier pieces, they can become small enough that, just like dust off a farm field, these microplastics can become airborne where we breathe them in! Microplastics are as large as 5mm (about the height of a pencil eraser) and they are hoping to find them as small as 45 micrometers (about the width of a human hair). To a juvenile fish their first few meals is critical to their survival and growth, but with such a variety of sizes and colors of plastics floating in the water column it’s often mistaken for food and ingested. In addition to the plastic pieces we can see with our eyes there is a background level of plastics even in the air we breathe that we can’t see, but they could show up in our analytical observations so Katherine has a unique system to keep everything clean. 

In order to quantify the amount of plastics in fish, you have to digest some of the fish guts. PC: Katherine Lasdin

Katherine is co-advised by Dr. Susanne Brander who’s lab studies microplastics in marine ecosystems. In order to keep plastics out of their samples, they need to carefully monitor the air flow in the lab. A HEPA filtration laminar flow hood blows purified air towards samples they’re working with in the lab and pushes that clean air out into the rest of the lab. There is a multi-staged glassware washing procedure requiring multiple ethanol rinses, soap wash, deionized water rinses, a chemical solvents rinse, another ethanol, and a final combustion of the glass in a furnace at 350°C for 12-hours to get rid of any last bit of contamination. And everyday that someone in Dr. Brander’s lab works in the building they know exactly what they’re wearing; not to look cool, but to minimize any polyester clothing and maximize cotton clothing so there is even less daily contamination of plastic fibers. These steps are taken because plastics are everywhere, and Katherine is determined to find out just big the problem may be for Oregon’s fish.  

Katherine Lasdin working in the laminar flow hood that blows purified air towards the samples in Dr. Brander’s lab. PC: Cheyenne Pozar

Be sure to listen to the interview Sunday 7PM, either on the radio 88.7KBVR FM or live-stream, to learn how Katherine is conducting her research off the coast of Oregon to better understand our ocean ecosystems in the age of humans.

Listen to the podcast episode!

On this episode at the 16:00 mark we described how every time you wash clothing you will loose some microfibers; and how a different student was looking at this material under microscopes. That person is Sam Athey, a PhD student at the University of Toronto who also studies microplastics.

Exploring the disconnect between humans and the ocean

Unseen associations

We are all connected to the ocean, and organisms living in the ocean are an integral – if often unseen – part of our lives. You might be more connected to the ocean than you think. For example, fertilizer used to grow vegetables is often made from fish, and ingredients derived from fish are often added to processed foods. And amazingly, the ocean produces more than half of the oxygen on the planet, while also being responsible for storing 50 times more carbon dioxide than is found in the atmosphere.

The impact of human activity can be observed in a variety of ways. Run-off from agriculture empties into fragile marine ecosystems, and plastic accumulates in the ocean and cycles back into our food supply, for example. Consequences of human activity disturb a precarious balance that is not fully understood. Within the American mind, there is a fractured connection to the ocean, and it is this disconnect that Samm Newton is studying. As a 3rd year Master’s student in the Environmental Arts and Humanities program in the College of Liberal Arts, she is exploring multiple questions as part of her thesis. What has been the role of science and technology in how we have known the ocean? What has been the relationship between that knowledge and how we have valued and made decisions about marine systems? And, how can scholars approach the study of these relationships in new ways?

Scientific inquiry is a tangled knot: the direction of research is often decided based on narrow criteria

Scientific funding agencies have often determined the direction of research based on the priorities of a moment in time. Some priorities arose from crises, while others might have been derived from a perceived risk to lives in human or animal communities. Other priorities were influenced by what types of technology and datasets were available. Within that structure, it has been difficult for science to be innovative if it doesn’t address a problem that has been classified as relevant by funding authorities. Samm explains further, “we have taken the environment, deconstructed its components, and focused only on certain aspects that we deemed interesting at a given moment, while the rest of the pieces slid into the background.”

Samm studies the ocean using methods traditionally associated with the humanities. She describes her method as an interdisciplinary approach to unpack how we have generated knowledge about the ocean through science. Her approach includes extracting information from scientific history and papers, archives, oral histories, as well as popular literature from sources like National Geographic and the Washington Post.

Different ways to think about our connection with the ocean

How can we encourage people to recognize their connection to the ocean, and direct their attention to how their lives are impacted by ocean issues? Samm indicates how advancements in technology and media have created new ways for people to access scientific knowledge about the ocean. With outlets such as Nautilus live, people can learn about ocean ecosystems by watching videos of organisms living in the sea. They can also interact with scientists in real time (check out this one about a large number of octopus brooding near Monterey Bay, CA. Science videos on the internet have become an engaging and popular way to share knowledge of the ocean and science with a broad audience.

“The ocean is very special to me.”

Samm grew up in the “shadow of the petrochemical industry” in Freeport, Texas, where the sea is brown, and air and water pollution are an everyday reality. Observing these anthropogenic forces impacting her coast and community, and how disconnected people seem to be from the ocean, led her to question the relationship between humans and marine environments. She found that science and technology have played a dominant role in how we have known the ocean—and possibly how we have valued it. Samm also found that methods from the humanities, particularly marine environmental history, as well as science and technology studies, provide a meaningful framework to examine that relationship further.

During her undergrad, Samm studied psychology and behavioral neuroendocrinology, with a focus toward consciousness and philosophy of the mind. She spent 10 years working outside of academia before pursuing a Master’s degree at OSU. Samm credits the Environmental Arts and Humanities program at OSU with providing a flexible framework for people from different backgrounds – including art and science – to decide how they want to study a topic of interest.

After finishing her Master’s degree, Samm plans to pursue a PhD in an interdisciplinary field studying environmental issues. As a graduate student at OSU, Samm has enjoyed working in a “scholarly space, and getting the opportunity to do research.” Beyond grad school, Samm’s goal is to be involved in work that transforms the world, and to contribute to projects that strengthen interdisciplinary associations between diverse, yet interconnected, academic fields.

Check out Samm’s exhibit at Autzen House on the OSU campus:The Need to Know Comes in Waves: Paintings by Samm Newton

On view from Sept. 20th – Dec. 15th, 10 AM – 4 PM at Autzen House (811 SW Jefferson)

Reception Oct. 18th, 4 – 6 PM; mini artist talks at 4:30 and 5:30

Samm will also be the Featured Artist at Hatfield Marine Science Center in Newport, OR in January 2019. Check out this page for more details!

Stream ecosystems and a changing climate

Examining the effect of climate change on stream ecosystems

Oak Creek near McDonald Dunn research lab. The salamander and trout in the experiments were collected along this stretch of creek.

As a first year Master’s student in the lab of Ivan Arismendi, Francisco Pickens studies how the changing, warming climate impacts animals inhabiting stream ecosystems. A major component of stream ecosystem health is rainfall. In examining and predicting the effects of climate change on rainfall, it is important to consider not only the amount of rainfall, but also the timing of rainfall. Although a stream may receive a consistent amount of rain, the duration of the rainy season is projected to shrink, leading to higher flows earlier in the year and a shift in the timing of the lowest water depth. Currently, low flow and peak summer temperature are separated by time. With the shortening and early arrival of the rainy season, it is more likely that low flow and peak summer temperature will coincide.

A curious trout in one of the experimental tanks.

Francisco is trying to determine how the convergence of these two events will impact the animals inhabiting streams. This is an important question because the animals found in streams are ectothermic, meaning that they rely on their surrounding environment to regulate their body temperature. Synchronization of the peak summer temperature with the lowest level of water flow could raise the temperature of the water, profoundly impacting the physiology of the animals living in these streams.

 

 

How to study animals in stream ecosystems?

Salamander in its terrestrial stage.

Using a simulated stream environment in a controlled lab setting, Francisco studies how temperature and low water depth impact the physiology and behavior of two abundant stream species – cutthroat trout and the pacific giant salamander. Francisco controls the water temperature and depth, with depth serving as a proxy for stream water level.

Blood glucose level serves as the experimental readout for assessing physiological stress because elevated blood glucose is an indicator of stress. Francisco also studies the animals’ behavior in response to changing conditions. Increased speed, distance traveled, and aggressiveness are all indicators of stress. Francisco analyzes their behavior by tracking their movement through video. Manual frame-by-frame video analysis is time consuming for a single researcher, but lends itself well to automation by computer. Francisco is in the process of implementing a computer vision-based tool to track the animals’ movement automatically.

The crew that assisted in helping collect the animals: From left to right: Chris Flora (undergraduate), Lauren Zatkos (Master’s student), Ivan Arismendi (PI).

Why OSU?

Originally from a small town in Washington state, Francisco grew up in a logging community near the woods. He knew he wanted to pursue a career involving wild animals and fishing, with the opportunity to work outside. Francisco came to OSU’s Department of Fisheries and Wildlife for his undergraduate studies. As an undergrad, Francisco had the opportunity to explore research through the NSF REU program while working on a project related to algae in the lab of Brooke Penaluna. After he finishes his Master’s degree at OSU, Francisco would like to continue working as a data scientist in a federal or state agency.

Tune in on Sunday, June 24th at 7pm PST on KBVR Corvallis 88.7 FM, or listen live at kbvr.com/listen.  Also, check us out on Apple Podcasts!

Ocean sediment cores provide a glimpse into deep time

Theresa on a recent cruise on the Oceanus.
Photo credit: Natasha Christman.

First year CEOAS PhD student Theresa Fritz-Endres investigates how the productivity of the ocean in the equatorial Pacific has changed in the last 20,000 years since the time of the last glacial maximum. This was the last time large ice sheets blanketed much of North America, northern Europe, and Asia. She investigates this change by examining the elemental composition of foraminifera (or ‘forams’ for short) shells obtained from sediment cores extracted from the ocean floor. Forams are single-celled protists with shells, and they serve as a proxy for ocean productivity, or organic matter, because they incorporate the elements that are present in the ocean water into their shells. Foram shell composition provides information about what the composition of the ocean was like at the point in time when the foram was alive. This is an important area of study for learning about the climate of the past, but also for understanding how the changing climate of today might transform ocean productivity. Because live forams can be found in ocean water today, it is possible to assess how the chemistry of seawater is currently being incorporated into their shells. This provides a useful comparison for how ocean chemistry has changed over time. Theresa is trying to answer the question, “was ocean productivity different than it is now?”

Examples of forams. For more pictures and information, visit the blog of Theresa’s PI, Dr. Jennifer Fehrenbacher: http://jenniferfehrenbacher.weebly.com/blog

Why study foram shells?

Foram shells are particularly useful for scientists because they preserve well and are found ubiquitously in ocean sediment, offering a consistent glimpse into the dynamic state of ocean chemistry. While living, forams float in or near the surface of the sea, and after they die, they sink to the bottom of the sea floor. The accumulating foram shells serve as an archive of how ocean conditions have changed, like how tree rings reflect the environmental conditions of the past.

Obtaining and analyzing sediment cores

Obtaining these records requires drilling cores (up to 1000 m!) into deep sea sediments, work that is carried out by an international consortium of scientists aboard large ocean research vessels. These cores span a time frame of 800 million years, which is the oldest continuous record of ocean chemistry. Each slice of the core represents a snapshot of time, with each centimeter spanning 1,000 years of sediment accumulation. Theresa is using cores that reach a depth of a few meters below the surface of the ocean floor. These cores were drilled in the 1980s by a now-retired OSU ship and are housed at OSU.

Theresa on a recent cruise on the Oceanus, deploying a net to collect live forams. Photo credit: Natasha Christman.

The process of core analysis involves sampling a slice of the core, then washing the sediment (kind of like a pour over coffee) and looking at the remainder of larger-sized sediment under a powerful microscope to select foram species. The selected shells undergo elemental analysis using mass spectrometry. Vastly diverse shell shapes and patterns result in different elements and chemistries being incorporated into the shells. Coupled to the mass spectrometer is a laser that ablates through the foram shell, providing a more detailed view of the layers within the shell. This provides a snapshot of ocean conditions for the 4 weeks-or-so that the foram was alive. It also indicates how the foram responded to light changes from day to night.

Theresa is early in her PhD program, and in the next few years plans to do field work on the Oregon coast and on Catalina island off the coast of California. She also plans to undertake culturing experiments to further study the composition of the tiny foram specimens.

Why grad school at OSU?

Theresa completed her undergraduate degree at Queen’s University in Ontario, followed by completion of a Master’s degree at San Francisco State University. She was interested in pursuing paleo and climate studies after transformative classes in her undergrad. In between her undergraduate and Master’s studies she spent a year working at Mt. Evans in Colorado as part of the National Park Service and Student Conservation Association.

Theresa had already met her advisor, Dr. Jennifer Fehrenbacher, while completing her Master’s degree at SF State. Theresa knew she was interested in attending OSU for grad school for several reasons: to work with her advisor, and to have access to the core repository, research ships, and technical equipment available at OSU.

To hear more about Theresa’s research and her experience as a PhD student at OSU, tune in on Sunday, June 10th at 7pm on KBVR Corvallis 88.7 FM, or listen live at kbvr.com/listen.  Also, check us out on Apple Podcasts!

Breaking the Arctic ice

 

Thermal AVHRR image with land masked in black. Can see the lead coming off of Barrow Alaska very bright. The arrows are sea ice drift vectors.

Cascade over mossy rocks near Sol Duc Falls, Olympic National Park, WA.

When you hear about fractures in sea ice, you might visualize the enormous fissures that rupture ice shelves, which release massive icebergs to the sea. This is what happened back in July 2017 when a Delaware-sized iceberg broke off from the Larsen C ice shelf in Antarctica. However, there are other types of fractures occurring in sea ice that may be impacted by atmospheric conditions. Our guest this week, CEOAS Masters student Ben Lewis investigates how interactions between the atmosphere and sea ice in the Beaufort Sea (north of Alaska in the Canadian Archipelago) impact the formation of fractures. His research involves mapping atmospheric features, such as wind and pressure, at the point in time when the fractures occurred and provides insight into the effect of the atmosphere on the formation and propagation of fractures. Utilizing satellite imagery compiled by the Geographical Information Network of Alaska from 1993 to 2013, Ben has conducted a qualitative analysis to determine the location and time when these ice fractures occurred and what type of physical characteristics they possess.

Southern Alps from the summit of Avalanche Peak, New Zealand.

While fractures appear small on the satellite image, the smallest fractures that Ben can observe by are actually 250 meters wide. Fractures can span hundreds of kilometers, and the propagate very quickly; Ben cites one example of a fracture near Barrow, Alaska that grew to 500 kilometers within 6 hours!

Fractures are potentially deadly for people and animals hunting in the Arctic. As weather flux in the fragile Arctic ecosystem has become more erratic with climate change, it has been difficult for people to predict when it was safe to hunt on the ice based on patterns observed in prior seasons. Additionally, it has been problematic to track weather in the Arctic because of its harsh conditions and sparse population. A well-catalogued record of weather is not available for all locations. Modeling atmospheric conditions, such as pressure and wind, based on what has been captured by satelliteimagery, will facilitate better prediction of future fracture events.

Sunset over Sandfly Beach, New Zealand.

While pursuing an undergraduate degree in physics at the University of Arkansas, Ben was able to study abroad James Cook University in Australia, where he gravitated towards environmental physics, while taking advantage of incredible opportunities for nature photography. He also did a semester abroad in New Zealand, where he studied geophysical fluid dynamics and partial differential equations. Ben came to OSU as a post-baccalaureate student in climate science, and while at OSU, he became acquainted with his future PI, Jennifer Hutchings,  and his interest in Arctic research grew. He cites learning about snowball earth, glaciology, and the cryosphere, as providing the basis for his desire to pursue Arctic climate research. Eventually, Ben would like to pursue a PhD, but in the immediate future, he plans to keep his options open for teaching and research opportunities.

 

Using sediment cores to model climate conditions

In the lab of Andreas Schmittner in the College of Earth, Ocean, and Atmospheric Sciences, recently-graduated PhD student Juan Muglia has been developing a climate model to understand ocean current circulation, carbon cycling, and ocean biogeochemistry during the last ice age, focusing on the Southern Ocean surrounding Antarctica.

Juan has developed a climate model using data gathered from sediment cores, which are samples from the ocean floor that provide researchers with a glimpse into the elemental and organic composition of the ocean at different points in time. Scientists can acquire insight into the characteristics of the Earth’s past climate by analyzing the geologic record spanning thousands of years. Modeling the conditions of the last ice age, which occurred 20,000 years ago, allows researchers to better understand how the Earth responds to glacial and interglacial cycles, prompting the transition between cold and warm phases (we are currently in a warm interglacial period).

The process of generating an accurate climate model consists of tuning parameters embedded in the physics equations and fortran code of the model, to reproduce characteristics directly observable in modern times. If researchers can validate their model by reproducing directly observable characteristics, the model can then be used to investigate the climate at points in time beyond our direct observational capacity.

Since it’s not possible to directly measure temperature or nutrient composition of the ocean during the last ice age, Juan uses an indirect signature that serves as a proxy for direct measurement. Three isotopic sediment tracers, including 15Nitrogen, 14Carbon, and 13Carbon, are incorporated into Juan’s climate model as proxies for biological productivity and current circulation in the ocean. Investigating changes in the elemental composition of the ocean, also known as biogeochemistry, is important for understanding how climate and biology have transformed over thousands of years. The ocean serves as an enormous reservoir of carbon, and much more carbon is sequestered in the ocean than in the atmosphere. The exchange of carbon dioxide at the interface of the ocean and atmosphere is important for understanding how carbon dioxide has and will continue to impact pH, ocean currents, and biological productivity of the ocean.

Even as a kid, Juan dreamed of becoming an oceanographer. He grew up near the ocean in Argentina, surrounded by scientists; his mom was a marine botanist and his dad is a geologist. During his undergraduate studies, he majored in physics with the goal of eventually becoming a physical oceanographer, and his undergraduate thesis consisted of building fortran code for a statistical physics project. After finishing his post-doctoral studies at OSU, Juan plans to return to his hometown in Argentina, where he hopes to develop a model specific to the Argentinian climate.

From the River to the Sea: Rare metal cycles and the Circle of Life

Sometime around 3.4 billion years ago, the planet earth was covered in an atmosphere of nitrogen and carbon dioxide poisonous to life as we know it today. Then something changed. Tiny photosynthetic organisms called cyanobacteria started converting carbon dioxide to oxygen, and over billions of years seaweed, kelp, and finally terrestrial plants with roots systems covered the globe, making  the entire history of animal life of Earth possible. We know this because a rare metal called molybdenum, found in ocean floor sediment cores, can be measured to show when the atmosphere changed.

Or maybe not. Maybe we’re wrong about all of that. Who can say? Here to challenge the accepted timeline of life as we know it is Elizabeth King. This Sunday Liz will walk us through a comparative study she has been working on in Oregon and the Big Island, Hawaii, underneath Dr. Julie Pett-Ridge. A Graduate student in Ocean Ecology and Biogeochemistry (CEOAS), and working with the Crop and Soil Science deparment through her advisor, Dr. Pett-Ridge, Liz hopes to uncover the truth about molybdenum. Showing that this metal travels from rivers to the ocean and back through precipitation in a cycle that is dependent on the soil and weathering processes in these different volcanic regions, Liz argues that scientists haven’t been seeing the big picture of molybdenum’s environmental history.

Liz at a sampling location

Liz at a sampling location

Molybdenum is increasingly recognized as an important agricultural nutrient, and understanding how it travels through the soil, streams, and waters of the Pacific Northwest and the world is highly valuable in keeping our land fertile and productive. To learn more, tune in Sunday night at 88.7 FM Pacific time, or steam the show live!

Liz at the mouth of a river she studies on the Big Island, Hawaii.

Liz at the mouth of a river she studies on the Big Island, Hawaii.