{"id":268,"date":"2015-07-25T20:28:12","date_gmt":"2015-07-25T20:28:12","guid":{"rendered":"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/?p=268"},"modified":"2015-07-25T20:28:12","modified_gmt":"2015-07-25T20:28:12","slug":"week-4-bacterial-blight-ergot-and-cruciferous-transplants","status":"publish","type":"post","link":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/2015\/07\/25\/week-4-bacterial-blight-ergot-and-cruciferous-transplants\/","title":{"rendered":"Week 4- Bacterial Blight, Ergot, and Cruciferous Transplants"},"content":{"rendered":"<p>There was a lot going on during\u00a0week 4! One of the main projects we worked on was a bacteria blight assay.<\/p>\n<p>These carrots were infected with the bacteria in the greenhouse so that their growth wouldn&#8217;t be influenced by outside factors.<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11749468_748364855272946_683804637_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-276 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11749468_748364855272946_683804637_n.jpg\" alt=\"11749468_748364855272946_683804637_n\" width=\"704\" height=\"960\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11749468_748364855272946_683804637_n.jpg 704w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11749468_748364855272946_683804637_n-220x300.jpg 220w\" sizes=\"auto, (max-width: 704px) 100vw, 704px\" \/><\/a><\/p>\n<p>One\u00a0of the visible effects of the blight is the presence of\u00a0yellowed, unhealthy leaves&#8230;<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11693224_748364868606278_1508478259_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-269 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11693224_748364868606278_1508478259_n.jpg\" alt=\"11693224_748364868606278_1508478259_n\" width=\"960\" height=\"717\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11693224_748364868606278_1508478259_n.jpg 960w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11693224_748364868606278_1508478259_n-300x224.jpg 300w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a><\/p>\n<p>Additional visible cues of bacterial blight are pockets of bacterial goo&#8230;<\/p>\n<figure id=\"attachment_283\" aria-describedby=\"caption-attachment-283\" style=\"width: 960px\" class=\"wp-caption alignnone\"><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11756517_748365048606260_1028778601_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-283 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11756517_748365048606260_1028778601_n.jpg\" alt=\"11756517_748365048606260_1028778601_n\" width=\"960\" height=\"717\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11756517_748365048606260_1028778601_n.jpg 960w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11756517_748365048606260_1028778601_n-300x224.jpg 300w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a><figcaption id=\"caption-attachment-283\" class=\"wp-caption-text\">Kind of hard to see, but look near to where the small shoot is extending from the plant.<\/figcaption><\/figure>\n<p>We chopped off the tops of the carrots and cut up the flowers, stem, and leaves.<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11721221_748364978606267_1312924759_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-272 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11721221_748364978606267_1312924759_n.jpg\" alt=\"11721221_748364978606267_1312924759_n\" width=\"704\" height=\"960\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11721221_748364978606267_1312924759_n.jpg 704w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11721221_748364978606267_1312924759_n-220x300.jpg 220w\" sizes=\"auto, (max-width: 704px) 100vw, 704px\" \/><\/a><\/p>\n<p>We then soaked the chopped carrot medley in phosphate buffer to allow the bacteria to transfer from the plant to the buffer, which we then plated onto petri dishes.<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11749625_748364691939629_1139000889_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-279 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11749625_748364691939629_1139000889_n.jpg\" alt=\"11749625_748364691939629_1139000889_n\" width=\"704\" height=\"960\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11749625_748364691939629_1139000889_n.jpg 704w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11749625_748364691939629_1139000889_n-220x300.jpg 220w\" sizes=\"auto, (max-width: 704px) 100vw, 704px\" \/><\/a><\/p>\n<p>The carrots were then drained from the buffer and dried. The dried leftovers were weighed. Once we get the bacteria information from the petri dishes, we&#8217;ll be able to see how much bacteria there is per gram of carrot folliage.<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11717286_748365028606262_1648238107_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-271 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11717286_748365028606262_1648238107_n.jpg\" alt=\"11717286_748365028606262_1648238107_n\" width=\"960\" height=\"717\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11717286_748365028606262_1648238107_n.jpg 960w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11717286_748365028606262_1648238107_n-300x224.jpg 300w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a><\/p>\n<p>The second project was scoring ergot, which meant counting the number of sclerotia (the infected seed heads) caused by ergot. A couple of weeks ago, I harvested some Kentucky Blue Grass from one of the experimental fields that had been inoculated with the ergot.\u00a0There were twelve different trials being tested to see which ones would best combat the ergot. These twelve trials were each tested in four different sections\u00a0of the plot, making a total of forty-eight sampling bags. When picking the blue grass, I took ten handfuls down one side of the row and ten down the other, to make for an even sampling.<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11787438_748365318606233_1225063866_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-294 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11787438_748365318606233_1225063866_n.jpg\" alt=\"11787438_748365318606233_1225063866_n\" width=\"960\" height=\"717\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11787438_748365318606233_1225063866_n.jpg 960w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11787438_748365318606233_1225063866_n-300x224.jpg 300w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a><\/p>\n<p>First step, dump it out!<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11756472_748365338606231_552957133_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-282 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11756472_748365338606231_552957133_n.jpg\" alt=\"11756472_748365338606231_552957133_n\" width=\"960\" height=\"717\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11756472_748365338606231_552957133_n.jpg 960w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11756472_748365338606231_552957133_n-300x224.jpg 300w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a><\/p>\n<p>Spread out the grass evenly&#8230;<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11759592_748365365272895_637850565_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-285 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11759592_748365365272895_637850565_n.jpg\" alt=\"11759592_748365365272895_637850565_n\" width=\"960\" height=\"717\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11759592_748365365272895_637850565_n.jpg 960w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11759592_748365365272895_637850565_n-300x224.jpg 300w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a><\/p>\n<p>Then you randomly choose a seed head without looking.<\/p>\n<p>This seed head is looking healthy!<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11774520_748365371939561_1651429158_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-286 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11774520_748365371939561_1651429158_n.jpg\" alt=\"11774520_748365371939561_1651429158_n\" width=\"960\" height=\"717\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11774520_748365371939561_1651429158_n.jpg 960w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11774520_748365371939561_1651429158_n-300x224.jpg 300w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a><\/p>\n<p>These two each have multiple sclerotia on them. The sclerotium\u00a0are the black parts of the seed head.<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11787490_748365298606235_1525959797_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-295 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11787490_748365298606235_1525959797_n.jpg\" alt=\"11787490_748365298606235_1525959797_n\" width=\"704\" height=\"960\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11787490_748365298606235_1525959797_n.jpg 704w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11787490_748365298606235_1525959797_n-220x300.jpg 220w\" sizes=\"auto, (max-width: 704px) 100vw, 704px\" \/><\/a><\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11749457_748365301939568_528682682_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-275 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11749457_748365301939568_528682682_n.jpg\" alt=\"11749457_748365301939568_528682682_n\" width=\"704\" height=\"960\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11749457_748365301939568_528682682_n.jpg 704w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11749457_748365301939568_528682682_n-220x300.jpg 220w\" sizes=\"auto, (max-width: 704px) 100vw, 704px\" \/><\/a><\/p>\n<p>I tested 100 stalks per bag. For each bag, I wrote down how many stalks\u00a0were infected and how many seed heads on each stalk were infected. This information will be used to see which trial (type of blue grass) combats ergot the best.<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11774690_748365321939566_350158142_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-287 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11774690_748365321939566_350158142_n.jpg\" alt=\"11774690_748365321939566_350158142_n\" width=\"704\" height=\"960\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11774690_748365321939566_350158142_n.jpg 704w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11774690_748365321939566_350158142_n-220x300.jpg 220w\" sizes=\"auto, (max-width: 704px) 100vw, 704px\" \/><\/a><\/p>\n<p>One of the other projects we worked on was continuing the cruciferous plant project. This is what they looked like after <a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/2015\/07\/06\/week-2-the-buffer-did-it\/\">planting them<\/a>&#8230;<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11749632_744742498968515_1575026722_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-298 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11749632_744742498968515_1575026722_n.jpg\" alt=\"11749632_744742498968515_1575026722_n\" width=\"960\" height=\"717\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11749632_744742498968515_1575026722_n.jpg 960w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11749632_744742498968515_1575026722_n-300x224.jpg 300w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a><\/p>\n<p>Tiny\u00a0forests of micro-mustard, arugula, and broccoli!<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11739491_744742525635179_2115375346_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-297 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11739491_744742525635179_2115375346_n.jpg\" alt=\"11739491_744742525635179_2115375346_n\" width=\"704\" height=\"960\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11739491_744742525635179_2115375346_n.jpg 704w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11739491_744742525635179_2115375346_n-220x300.jpg 220w\" sizes=\"auto, (max-width: 704px) 100vw, 704px\" \/><\/a><\/p>\n<p>We transplanted five to six plants per pot, and six pots per flat.<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11778021_748365098606255_768696586_n.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-288 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11778021_748365098606255_768696586_n.jpg\" alt=\"11778021_748365098606255_768696586_n\" width=\"960\" height=\"717\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11778021_748365098606255_768696586_n.jpg 960w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11778021_748365098606255_768696586_n-300x224.jpg 300w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a><\/p>\n<p>When we transplanted them, their chance of survival was looking slim.\u00a0However, they&#8217;ve continued to grow stronger and are now looking like healthy little plants again!<\/p>\n<p><a href=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11798389_749639081812190_1870482678_n1.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-307 size-full\" src=\"http:\/\/blogs.oregonstate.edu\/bessummerinternship2015\/files\/2015\/07\/11798389_749639081812190_1870482678_n1.jpg\" alt=\"11798389_749639081812190_1870482678_n\" width=\"960\" height=\"717\" srcset=\"https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11798389_749639081812190_1870482678_n1.jpg 960w, https:\/\/osu-wams-blogs-uploads.s3.amazonaws.com\/blogs.dir\/2255\/files\/2015\/07\/11798389_749639081812190_1870482678_n1-300x224.jpg 300w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a><\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>There was a lot going on during\u00a0week 4! One of the main projects we worked on was a bacteria blight assay. These carrots were infected with the bacteria in the greenhouse so that their growth wouldn&#8217;t be influenced by outside factors. One\u00a0of the visible effects of the blight is the presence of\u00a0yellowed, unhealthy leaves&#8230; Additional &hellip; <a href=\"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/2015\/07\/25\/week-4-bacterial-blight-ergot-and-cruciferous-transplants\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">Week 4- Bacterial Blight, Ergot, and Cruciferous Transplants<\/span><\/a><\/p>\n","protected":false},"author":6974,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-268","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/wp-json\/wp\/v2\/posts\/268","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/wp-json\/wp\/v2\/users\/6974"}],"replies":[{"embeddable":true,"href":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/wp-json\/wp\/v2\/comments?post=268"}],"version-history":[{"count":10,"href":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/wp-json\/wp\/v2\/posts\/268\/revisions"}],"predecessor-version":[{"id":311,"href":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/wp-json\/wp\/v2\/posts\/268\/revisions\/311"}],"wp:attachment":[{"href":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/wp-json\/wp\/v2\/media?parent=268"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/wp-json\/wp\/v2\/categories?post=268"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/dev.blogs.oregonstate.edu\/bessummerinternship2015\/wp-json\/wp\/v2\/tags?post=268"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}